Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866057:139866095:[+] chr6:45163582:45163633:[-] nonBSJ supported Intron

circRNA 5':AUUUGGGUCUUCCUGAAAAUC------UACG-----UCU--UCCAAAA-AAGC 3'


            ||||::|||: |||| || |||: ||| ||| |||


target  3':CAAACUUAGAGUGACUCC-AGCCAUCAAUGUUUGAAAGACUAGGGCCCGUUCA 5'

 -16.50 2 RIC-seq
chrX:139866061:139866073:[+] chr6:45163585:45163598:[-] nonBSJ supported Intron

circRNA 5': GGGUCUUCCUGAA 3'


            |::|||: ||||


target  3':ACUUAGAGUGACUC 5'

 -12.70 1 RIC-seq
chrX:139866061:139866095:[+] chr6:45163585:45163633:[-] nonBSJ supported Intron

circRNA 5': GGGUCUUCCUGAAAAUC------UACG-----UCU--UCCAAAA-AAGC 3'


            |::|||: |||| || |||: ||| ||| |||


target  3':ACUUAGAGUGACUCC-AGCCAUCAAUGUUUGAAAGACUAGGGCCCGUUCA 5'

 -14.20 1 RIC-seq