Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865506:139865538:[+] chr19:39944131:39944162:[+] nonBSJ supported CDS

circRNA 5':UCCAAGUCU--UCCAGUAAAUCAAGUCUUCCA--GCA 3'


            || ||:|| ||||| ||| ||| |:|||| ||


target  3': GG-UCGGAGCAGGUC--UUACUUC-GGAGGUACCGC 5'

 -23.40 1 RIC-seq
chrX:139865506:139865538:[+] chr19:39944132:39944162:[+] nonBSJ supported CDS

circRNA 5':UCCAAGUCU--UCCAGUAAAUCAAGUCUUCCA--GCA 3'


            || ||:|| ||||| ||| ||| |:|||| ||


target  3': GG-UCGGAGCAGGUC--UUACUUC-GGAGGUACCG 5'

 -23.60 16 RIC-seq