Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865433:139865456:[+] chr1:226034494:226034514:[-] nonBSJ supported Exon

circRNA 5':UCCUGAGCU-UCCAGAAAAUCCACA 3'


            |||| ||| ||| ||||


target  3':CGGACACGAGAGGAGU----GGUGA 5'

 -16.10 13 RIC-seq
chrX:139865433:139865466:[+] chr1:226034494:226034527:[-] nonBSJ supported Exon

circRNA 5':UCCUGAGCU-UCCAGAAAAUCCACAUCUU---CCAGAC 3'


            |||| ||| ||| |||| || |||||


target  3':CGGACACGAGAGGAGU----GGUGACGACCCUGGUCUU 5'

 -21.20 13 RIC-seq