Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865849:139865866:[+] chr16:3640270:3640286:[-] nonBSJ supported CDS

circRNA 5':CAGAAAAAUCUACGUCUU 3'


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target  3': UCUGCCUCUAAAAAGAC 5'

 -1.70 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr16:3640270:3640286:[-] target 3580490 chr16:3640272-3640273 AC>G Fanconi_anemia_complementation_group_P ClinVar
chr16:3640270:3640286:[-] target - chr16:3640274-3640275 G>A LAML-KR ICGC