Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865749:139865795:[+] chr13:39614448:39614494:[+] nonBSJ supported Intron

circRNA 5':CUUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCA--------GGUCUUCCAGU 3'


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target  3':UAAGGUCAGUA----AC-GAAAGUCU--CUGACGGUGAAAUAAACC-GAA-GUCAA 5'

 -26.10 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr13:39614448:39614494:[+] target - chr13:39614484-39614485 A>G PACA-CA ICGC