Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866256:139866275:[+] chrX:107869551:107869574:[+] nonBSJ supported CDS

circRNA 5':AGCCAUGUCUUCC----AGACUAU 3'


            |||| | || ||||:|


target  3':CUGGUCCUUCUGGACCUUCUGGUU 5'

 -11.00 1 RIC-seq
chrX:139866486:139866507:[+] chrX:107825998:107826018:[+] nonBSJ supported Intron

circRNA 5':ACAAAGGUACGUCUUCCAGAAA 3'


            ||||::| ||| |||||


target  3':CGUUUUUAC-CAGUCAGUCUUA 5'

 -11.40 20 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:107869551:107869574:[+] target - chrX:107869571-107869572 G>T LICA-CN ICGC