Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866614:139866666:[+]	chr17:20492990:20493051:[+]	nonBSJ supported	Exon	circRNA 5':AUCUCCAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAU---------CUGC-UCGUCU-----UCCAA 3' \|\|\|\|\|\|\| :\|\|\|\|\|\|\| \|::\|: \|\|\|\|\|: \|\|\| \|\|:\|\| \|\|\|\| target 3':AAGAGGUC---GAGGUCGUCCAC--CUUGGC-GUCGUGAACCUACCGGACCUAGUAGUCUAACAGGUC 5'	-40.30	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr17:20492990:20493051:[+]	target	-	chr17:20493011-20493012	G>T	LICA-CN	ICGC
chr17:20492990:20493051:[+]	target	-	chr17:20493013-20493014	C>A	LAML-KR	ICGC
chr17:20492990:20493051:[+]	target	-	chr17:20493040-20493041	G>A	LINC-JP	ICGC