Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866336:139866362:[+]	chr9:139258975:139259009:[-]	nonBSJ supported	CDS	circRNA 5': CUUC-CAGGAAA-UCCGUGU--CUU---CCAGCA 3' \|\|\|\| \| \|\| \|\|\| :\|: \|\|: \|\| \|\| target 3':GGAAGAGCCCGCCGAGGGGCGACGAGUCCGGACGC 5'	-18.00	1	RIC-seq
chrX:139866346:139866362:[+]	chr9:139258973:139258996:[-]	nonBSJ supported	CDS	circRNA 5':AUCC-------GUGUCUUCCAGCA 3' \|\|\| \|:\| \|\|:\|\| \|\| target 3':GAGGAAGAGCCCGCCGAGGGGCGA 5'	-13.30	1	RIC-seq
chrX:139866210:139866231:[+]	chr9:139259044:139259067:[-]	nonBSJ supported	Intron	circRNA 5': CUUCC---AGGAAAUCCGUGUCUUC 3' \|\|:\|\| \|\|\| \|\|:\|\|\|\| :\|\|\| target 3':CGAGGGGACUCCCUUGGGCA-GGAA 5'	-18.30	10	RIC-seq
chrX:139866336:139866357:[+]	chr9:139259044:139259067:[-]	nonBSJ supported	Intron	circRNA 5': CUUCC---AGGAAAUCCGUGUCUUC 3' \|\|:\|\| \|\|\| \|\|:\|\|\|\| :\|\|\| target 3':CGAGGGGACUCCCUUGGGCA-GGAA 5'	-18.30	3	RIC-seq