Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865773:139865808:[+] chr5:141690653:141690685:[-] nonBSJ supported 3UTR

circRNA 5':GAAAGAAAU--CCAGGUCUUCCAGUCAAUCAGUGUCUU 3'


            |||||| ||| |||||||| ||||: |||


target  3': UUUCUUGAUCGGUACAGAAGGUAG---AGUCG-AGAC 5'

 -26.70 28 RIC-seq
chrX:139865774:139865808:[+] chr5:141690653:141690685:[-] nonBSJ supported 3UTR

circRNA 5':AAAGAAAU--CCAGGUCUUCCAGUCAAUCAGUGUCUU 3'


           |||||| ||| |||||||| ||||: |||


target  3':UUUCUUGAUCGGUACAGAAGGUAG---AGUCG-AGAC 5'

 -26.30 1 RIC-seq