Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865709:139865737:[+] chr16:1568285:1568310:[-] nonBSJ supported CDS

circRNA 5':AGUCUUCCAGUAAAUCUAGUUCUUCCAGA 3'


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target  3':ACGACAGGUCC---AGACCAAGGAGGUCC 5'

 -25.60 34 RIC-seq
chrX:139865710:139865737:[+] chr16:1568285:1568310:[-] nonBSJ supported CDS

circRNA 5': GUCUUCCAGUAAAUCUAGUUCUUCCAGA 3'


            |: ||||| ||| ||||:|||||


target  3':ACGACAGGUCC---AGACCAAGGAGGUCC 5'

 -25.80 1 RIC-seq