Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865819:139865852:[+] chr7:77719013:77719052:[-] nonBSJ supported Intron

circRNA 5':AUCCAGGUCUUCCAGUCAGU----------CAGUGUCUUCCAGA 3'


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target  3':AAGGUUCAG--GG-CAGUCAAGAUGUACAUGGGACAG-AGGUCG 5'

 -31.60 2 RIC-seq
chrX:139865849:139865884:[+] chr7:77816583:77816617:[-] nonBSJ supported Intron

circRNA 5':CAGAAAAAUC-UACGUCUUCCACCAAAUCCAGGUCUU 3'


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target  3':UUCUUUAAAGUAUG--GUAAUAAUAAUAAAACCAGAU 5'

 -7.90 1 RIC-seq