Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865862:139865878:[+] chr7:77410559:77410572:[+] nonBSJ supported 3UTR

circRNA 5':GUCUUCCACCAAAUCCA 3'


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target  3':UGGAAGG-GA--UAGGG 5'

 -10.90 1 RIC-seq
chrX:139865862:139865887:[+] chr7:77410547:77410572:[+] nonBSJ supported 3UTR

circRNA 5':GUCUUCCACCAAAUCCA-GGU-CUUCCA 3'


            |||||| :||| |: |||||


target  3':UGGAAGGGAUA--GGGUACUUUGAAGGA 5'

 -17.30 35 RIC-seq
chrX:139866136:139866155:[+] chr7:77410555:77410572:[+] nonBSJ supported 3UTR

circRNA 5':GUCUUCCAGACUAU-CCAUGU 3'


            |||||| |||| |||||


target  3':UGGAAGG---GAUAGGGUACU 5'

 -15.40 1 RIC-seq
chrX:139866136:139866161:[+] chr7:77410547:77410572:[+] nonBSJ supported 3UTR

circRNA 5':GUCUUCCAGACUAU-CCAUGU--CUUCCA 3'


            |||||| |||| ||||| |||||


target  3':UGGAAGG---GAUAGGGUACUUUGAAGGA 5'

 -22.60 29 RIC-seq