5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865380:139865408:[+] | chr10:118764554:118764580:[-] | nonBSJ supported | CDS |
circRNA 5':CGGGUCUUCCAGCGACUUCAAGUCUUCCA 3' |:| || |||| |||| || ||| target 3':ACUC-GAC-GUCGACGAAGAGAAGCAGGC 5' |
-19.60 | 4 | RIC-seq |
| chrX:139865763:139865792:[+] | chr10:118645895:118645937:[-] | nonBSJ supported | CDS |
circRNA 5':GUGUCUUCCA------------GAAAGAAAUCCAG-GUCUUCC 3' ||||||| ||| || :||:||| target 3':GACAGAAGAAACAAAAGACCAACUUAAAGC-GGAAGUAGGAGGA 5' |
-14.80 | 2 | RIC-seq |
| chrX:139865763:139865793:[+] | chr10:118645895:118645937:[-] | nonBSJ supported | CDS |
circRNA 5':GUGUCUUCCA------------GAAAGAAAUCCAG-GUCUUCCA 3' ||||||| ||| || :||:||| target 3':GACAGAAGAAACAAAAGACCAACUUAAAGC-GGAAGUAGGAGGA 5' |
-16.10 | 27 | RIC-seq |
| chrX:139866017:139866055:[+] | chr10:118711472:118711515:[-] | nonBSJ supported | CDS |
circRNA 5':GAAAAUCCACG--UCUUCCC-AACA-AUCCAAGUCU-UC-CGGAU 3' |||||| ||:||| |||| || ||| || ||:| target 3': UUUUAGAAGAAAAGGAGGACUUGUCUAUGUUAAACUAGAGCUUC 5' |
-16.00 | 1 | RIC-seq |
| chrX:139866026:139866079:[+] | chr10:118711475:118711520:[-] | nonBSJ supported | CDS |
circRNA 5':CGUCUUCCCAACAAUCCAAGUCUUCC-----GGAUAAUUUG-GGUCUUCCUGAAAAUCUA 3' |||||| ||:||| :|||| |:|||: ||| ||| target 3': UAGAAGAAA----------AGGAGGACUUGUCUAUGUUAAACUAGAG---CUUCAAGAC 5' |
-20.40 | 1 | RIC-seq |
| chrX:139866042:139866086:[+] | chr10:118711472:118711512:[-] | nonBSJ supported | CDS |
circRNA 5':CAAGUCUUCCGGAUAAUUUGGGUCUUCCUGAAAAUCUAC------GUCUUC 3' ||:||||| ||:||||||| ||| :|||: target 3':UUUUAGAAGAAA----------AGGAGGACUUGUCUAUGUUAAACUAGAGC 5' |
-22.10 | 25 | RIC-seq |
| chrX:139866204:139866212:[+] | chr10:118674914:118674922:[-] | nonBSJ supported | CDS |
circRNA 5':CCGGGUCUU 3' ||||||| target 3':UGCCCAGAU 5' |
-12.60 | 12 | RIC-seq |