Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865438:139865445:[+] chr11:12963655:12963662:[+] nonBSJ supported 3UTR

circRNA 5':AGCUUCCA 3'


            || ||


target  3':ACGUUGGA 5'

 -6.20 1 RIC-seq
chrX:139865578:139865591:[+] chr11:12964642:12964653:[+] nonBSJ supported 3UTR

circRNA 5':CAGAUCUUCCAGGA 3'


            |||: |||||


target  3':UUCUGC--GGUCCA 5'

 -10.80 8 RIC-seq
chrX:139865761:139865784:[+] chr11:12923609:12923631:[+] nonBSJ supported CDS

circRNA 5':CAGUGUCU--UCCAGAAAGAAAUCCA 3'


            || |:|: ||||:| || |||


target  3':CUCCCGGGAAAGGUUUGUCA--AGG 5'

 -14.10 1 RIC-seq
chrX:139865800:139865823:[+] chr11:12923609:12923631:[+] nonBSJ supported CDS

circRNA 5':CAGUGUCU--UCCAGAAAGAAAUCCA 3'


            || |:|: ||||:| || |||


target  3':CUCCCGGGAAAGGUUUGUCA--AGG 5'

 -14.10 1 RIC-seq