Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865904:139865929:[+] chr9:137331427:137331454:[+] nonBSJ supported Exon

circRNA 5':CGGAAAAAAUCCAGGUC--UUCCAGC-CA 3'


            ||| || |||| :|||||| |


target  3': CCUCCCCGAGCCCCAGUAGAGGUCGUGA 5'

 -19.50 1 RIC-seq
chrX:139865904:139865929:[+] chr9:137331427:137331455:[+] nonBSJ supported Exon

circRNA 5':CGGAAAAAAUCCAGGUC--UUCCAGC-CA 3'


            ||| || |||| :|||||| |


target  3':CCCUCCCCGAGCCCCAGUAGAGGUCGUGA 5'

 -20.30 19 RIC-seq