Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866215:139866235:[+] chr11:117157914:117157931:[-] nonBSJ supported 3UTR

circRNA 5':AGGAAAUCCGUGUCUUCCAGC 3'


            ||| |:|:|| |||


target  3':CCCUCGCU-CGCGGA--GUCA 5'

 -10.90 25 RIC-seq
chrX:139866376:139866401:[+] chr11:117161218:117161253:[-] nonBSJ supported CDS

circRNA 5': CAACAAAGCCAUGUCU--------UCC-AUCAAAU 3'


            || |||||||| || :|| ||||||


target  3':UGUCGUUUCGGUUAAGCAAAAGCCCGGGCUAGUUUC 5'

 -18.10 12 RIC-seq
chrX:139866378:139866401:[+] chr11:117161221:117161253:[-] nonBSJ supported CDS

circRNA 5':ACAAAGCCAUGUCU--------UCC-AUCAAAU 3'


            |||||||| || :|| ||||||


target  3':CGUUUCGGUUAAGCAAAAGCCCGGGCUAGUUUC 5'

 -17.70 2 RIC-seq