Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865472:139865496:[+] chr1:164657300:164657319:[+] nonBSJ supported Intron

circRNA 5':AUGUCUUCCGGACAAUCCAUGUCUU 3'


            ||||::|||| ||| ||||


target  3': ACAGGGGGCCCGUUUC---CAGA 5'

 -20.30 2 RIC-seq
chrX:139865472:139865496:[+] chr1:164657300:164657320:[+] nonBSJ supported Intron

circRNA 5':AUGUCUUCCGGACAAUCCAUGUCUU 3'


            ||||::|||| ||| ||||


target  3':CACAGGGGGCCCGUUUC---CAGA 5'

 -20.60 2 RIC-seq