Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865671:139865698:[+] chr5:119829383:119829412:[+] nonBSJ supported Intron

circRNA 5':AUGUCUUCCAGAAAAA--UCUGUGUCUUCC 3'


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target  3':AACAGGCCCCGAUCCUUCAGAUACAGUUGU 5'

 -14.00 1 RIC-seq
chrX:139865686:139865749:[+] chr5:119829418:119829471:[+] nonBSJ supported Intron

circRNA 5':AUCUGUGUCUUCCACCAAAUCCAAGUCUUCC--AG-UAAAUC-UAGUUCUUCCAGAAAAAUCUAGAUC 3'


            ||||: |:|||| || ||||| ||| ||||| :||||


target  3':AAGACGAAUAUAUCG--------UUAGAACUUUUCUAUUUAAUAUCUUUAC---CUUUU---GUCUAA 5'

 -10.30 1 RIC-seq