Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865336:139865370:[+]	chrX:53117004:53117036:[+]	nonBSJ supported	CDS	circRNA 5': CCAGGGUUUCCGAUGGCACCUGUGUCAAGGUCUUC 3' \|\| :\|\|\|\| \| \|:\|\| \|\| \|\|\| :\|\|\|\| target 3':AGGGGAAGAAGGGU-CUGUAGA---AGUGAAGGAAGG 5'	-18.20	21	RIC-seq
chrX:139866405:139866467:[+]	chrX:53117003:53117041:[+]	nonBSJ supported	CDS	circRNA 5':UGUCUUCCAGCCUACUUGUGUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUACG-UCUUCCA 3' \|\|\|\|\|\|\| \|\|\| \|\|\|\|\|\| :\| \|\|:\|\|\|\|\| \|\| :\|\|\|\|\| target 3':UUAGAAGG--GGA-------AGAAGGG-----UC-UGUAGAAG----------UGAAGGAAGGA 5'	-30.80	12	RIC-seq
chrX:139866424:139866467:[+]	chrX:53117003:53117031:[+]	nonBSJ supported	CDS	circRNA 5':GUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUACG-UCUUCCA 3' \|\|\|\|\|\| :\| \|\|:\|\|\|\|\| \|\| :\|\|\|\|\| target 3':AAGAAGGG-----UC-UGUAGAAG----------UGAAGGAAGGA 5'	-21.60	1	RIC-seq