Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865836:139865881:[+] chr8:133134678:133134728:[-] nonBSJ supported 3UTR

circRNA 5':AGUCAGUGUCUUCCA-GAAAAAUC--UACG-UCUUC--CACCAAAUCCAGGU 3'


            | ||: |||| ||| |: |||: ||:| ||| ||:


target  3':GCUGUU-CAGAUUCUCCUUAAUGUUUAUGUAAGGACUCGUGACUCGAC-CCGA 5'

 -11.70 1 RIC-seq
chrX:139865842:139865887:[+] chr8:133134671:133134711:[-] nonBSJ supported 3UTR

circRNA 5':UGUCUUCCAGAAAAAUCUACGUCUUCCACCAAAUCCAGGUCUUCCA 3'


            |||: || || |||| | ||||| || ||||


target  3': CAGGUAAGCUGUUCAGAUUCUCCUUAAUGUUUAUGU----AAGGA 5'

 -12.30 1 RIC-seq
chrX:139865865:139865884:[+] chr8:133134671:133134688:[-] nonBSJ supported 3UTR

circRNA 5':UUCCACCAAAUCCAGGUCUU 3'


            |||| ||:||||


target  3':CAGGUAAGCU--GUUCAGAU 5'

 -10.80 1 RIC-seq
chrX:139866712:139866789:[+] chr8:133140525:133140578:[-] nonBSJ supported 3UTR

circRNA 5':GUCUUCCAACAACUACCC-AGUCUUCCAUCAACUGGCUCAAUAUCCAUGUCUUCCAACGUCUCCAGUGUGCUGAUCUUC 3'


            ||||| ||||:| |||:| ||| ||||||: ||||


target  3':AAGAAGUAAAUAUUUUCCUUCAGGAACC---UGAUCUUUUAA-----------------AGA---CACACGGA-AGAA 5'

 -21.10 8 RIC-seq
chrX:139866713:139866789:[+] chr8:133140525:133140578:[-] nonBSJ supported 3UTR

circRNA 5': UCUUCCAACAACUACCC-AGUCUUCCAUCAACUGGCUCAAUAUCCAUGUCUUCCAACGUCUCCAGUGUGCUGAUCUUC 3'


            ||||| ||||:| |||:| ||| ||||||: ||||


target  3':AAGAAGUAAAUAUUUUCCUUCAGGAACC---UGAUCUUUUAA-----------------AGA---CACACGGA-AGAA 5'

 -21.10 1 RIC-seq
chrX:139866741:139866789:[+] chr8:133140552:133140578:[-] nonBSJ supported 3UTR

circRNA 5':AACUGGCUCAAUAUCCAUGUCUUCCAACGUCUCCAGUGUGCUGAUCUUC 3'


            |||:| ||| ||||||: ||||


target  3':CUGAUCUUUUAA-----------------AGA---CACACGGA-AGAA 5'

 -14.20 1 RIC-seq
chrX:139866753:139866789:[+] chr8:133140545:133140578:[-] nonBSJ supported 3UTR

circRNA 5':AUCCAUGU-CUUCCAACG-UCUCCAGUGUGCUGAUCUUC 3'


            ||| || || ||| ||||||: ||||


target  3':CAGGAACCUGAUCUUUUAAAGA---CACACGGA-AGAA 5'

 -17.00 7 RIC-seq
chrX:139866754:139866789:[+] chr8:133140545:133140578:[-] nonBSJ supported 3UTR

circRNA 5': UCCAUGU-CUUCCAACG-UCUCCAGUGUGCUGAUCUUC 3'


            ||| || || ||| ||||||: ||||


target  3':CAGGAACCUGAUCUUUUAAAGA---CACACGGA-AGAA 5'

 -16.90 2 RIC-seq
chrX:139866150:139866160:[+] chr8:133152357:133152367:[-] nonBSJ supported CDS

circRNA 5':CCAUGUCUUCC 3'


            |||||||||


target  3':AGUACAGAAGC 5'

 -13.80 18 RIC-seq