Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865971:139865990:[+] chr1:205047019:205047040:[+] nonBSJ supported 3UTR

circRNA 5':UGUCUUCCAGAAAA--UCCAUG 3'


            |:| | || |||||


target  3':CCGGUUGCCCUCACCAAGGUAA 5'

 -6.90 2 RIC-seq
chrX:139865689:139865711:[+] chr1:205042920:205042945:[+] nonBSJ supported Exon

circRNA 5':UGUGUCU-UCCACCAAA---UCCAAGU 3'


            |||||: || ||| ||:


target  3': CACAGGCAGCCUCCACCGCAGG-UCGA 5'

 -8.90 2 RIC-seq