Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866190:139866218:[+] chr1:205033524:205033553:[+] nonBSJ supported CDS

circRNA 5':AGCUUCCAAAAAA-UCCGGGUCUUCCAGGA 3'


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target  3':CCGGAAACCUCGACGGGCCCCGACCGUCCC 5'

 -20.40 1 RIC-seq
chrX:139866386:139866425:[+] chr1:205034239:205034269:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAUCAAAUUAAUGUCUUCCAGCCUACUUGUGU 3'


            |||| :||| ||||| || ||||| |


target  3':AACAGUGGGUUCAAC---UACAGC----CG--UGAACUCC 5'

 -15.20 24 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr1:205033524:205033553:[+] target 2767108 chr1:205033532-205033533 G>GC Epilepsy,_familial_adult_myoclonic,_5 ClinVar