5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866169:139866211:[+] | chr17:79478933:79478971:[-] | nonBSJ supported | CDS |
circRNA 5':CUUGUCUUCCCUUAAAUCUAUAGCUUCCAAAAAAUCC-GGGUCU 3' |::||||| ||: ||:| |||:| target 3':CAGUAGAAGAGAGACAAC----CGGAACCCCAAGUCCCCCCGG 5' |
-16.60 | 1 | RIC-seq |
| chrX:139866169:139866212:[+] | chr17:79478933:79478972:[-] | nonBSJ supported | CDS |
circRNA 5':CUUGUCUUCCCUUAAAUCUAUAGCUUCCAAAAAAUCC-GGGUCUU 3' |::||||| ||: ||:| |||:|| target 3':CAGUAGAAGAGAGACAAC----CGGAACCCCAAGUCCCCCCGGA 5' |
-17.10 | 8 | RIC-seq |
| chrX:139866363:139866389:[+] | chr17:79478539:79478560:[-] | nonBSJ supported | CDS |
circRNA 5':AAUCCACGUCUUCCAACAAAG-CCAUGU 3' |:|| |||| |||| || ||||| target 3':CUGGG-GCAG-AGGUC---UCAGGUAC 5' |
-20.60 | 1 | RIC-seq |
| chrX:139866363:139866389:[+] | chr17:79478539:79478561:[-] | nonBSJ supported | CDS |
circRNA 5':AAUCCACGUCUUCCAACAAAG-CCAUGU 3' |:|| |||| |||| || ||||| target 3':CUGGG-GCAG-AGGUC---UCAGGUACU 5' |
-20.70 | 22 | RIC-seq |
| chrX:139866634:139866663:[+] | chr17:79478350:79478379:[-] | nonBSJ supported | CDS |
circRNA 5':CUCCAGGGCUUCC-AGCAUCUGCUCGUCUUC 3' |||||||| | ||||: ||| ||:| target 3':CAGGUCCCGCUGCAUCGUGU-CGAAGAGGAA 5' |
-29.60 | 20 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr17:79478539:79478560:[-] | target | 29585 | chr17:79478552-79478553 | G>A | Baraitser-winter_syndrome_2|Inborn_genetic_diseases|not_provided|Congenital_anomaly_of_kidney_and_urinary_tract | ClinVar |
| chr17:79478539:79478560:[-] | target | 1333817 | chr17:79478557-79478558 | C>T | Baraitser-winter_syndrome_2 | ClinVar |
| chr17:79478539:79478560:[-] | target | 473006 | chr17:79478559-79478560 | T>C | Autosomal_dominant_nonsyndromic_hearing_loss_20|Baraitser-winter_syndrome_2 | ClinVar |
| chr17:79478539:79478561:[-] | target | 29585 | chr17:79478552-79478553 | G>A | Baraitser-winter_syndrome_2|Inborn_genetic_diseases|not_provided|Congenital_anomaly_of_kidney_and_urinary_tract | ClinVar |
| chr17:79478539:79478561:[-] | target | 1333817 | chr17:79478557-79478558 | C>T | Baraitser-winter_syndrome_2 | ClinVar |
| chr17:79478539:79478561:[-] | target | 473006 | chr17:79478559-79478560 | T>C | Autosomal_dominant_nonsyndromic_hearing_loss_20|Baraitser-winter_syndrome_2 | ClinVar |
| chr17:79478933:79478971:[-] | target | 29586 | chr17:79478933-79478934 | G>A | Baraitser-winter_syndrome_2|not_provided|See_cases | ClinVar |
| chr17:79478933:79478971:[-] | target | 18316 | chr17:79478939-79478940 | T>A | Autosomal_dominant_nonsyndromic_hearing_loss_20|not_provided|Nonsyndromic_genetic_hearing_loss | ClinVar |
| chr17:79478933:79478972:[-] | target | 29586 | chr17:79478933-79478934 | G>A | Baraitser-winter_syndrome_2|not_provided|See_cases | ClinVar |
| chr17:79478933:79478972:[-] | target | 18316 | chr17:79478939-79478940 | T>A | Autosomal_dominant_nonsyndromic_hearing_loss_20|not_provided|Nonsyndromic_genetic_hearing_loss | ClinVar |