Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866570:139866623:[+] chr16:66651279:66651330:[-] nonBSJ supported Intron

circRNA 5':CUUCCAACU------AAGCUACGUCUUCCAACAAAUCCAUGUCUUCCUAUAUCUCCAGGU 3'


            |:|||| ||:|| || ||||| ||||| |||||:


target  3':UAGGGUUUCCAACUUUUUGA--CAU-AGGUUUACCUUUUUCUU----AUAUA-AGGUCUG 5'

 -15.70 1 RIC-seq
chrX:139866619:139866642:[+] chr16:66651267:66651288:[-] nonBSJ supported Intron

circRNA 5':CAGGUCUUCCAGCAUCUCCAGGGC 3'


            ||| ||| |||::|


target  3':UUCCUUUUUUUU-UAG-GGUUUCC 5'

 -9.90 1 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:139866570:139866623:[+] circRNA - chrX:139866592-139866593 C>A LICA-CN ICGC