Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865784:139865815:[+] chr12:132563231:132563262:[+] nonBSJ supported 3UTR

circRNA 5':AGGUCUUCCAGUCAA--UCAGUGUCUUCCAGAAA 3'


            ||:|: || |: :||:|: |||||||||


target  3':CCCGGGUGG-CGAUAUCGGUUAU-GAAGGUCUUA 5'

 -26.90 2 RIC-seq
chrX:139866755:139866771:[+] chr12:132564519:132564535:[+] nonBSJ supported 3UTR

circRNA 5':CCAUGUCUUCC--AACGUC 3'


            || | ||||| ||||:


target  3':UGU-C-GAAGGACUUGCGC 5'

 -10.40 4 RIC-seq