Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866258:139866286:[+] chr18:57134002:57134022:[-] nonBSJ supported 5UTR

circRNA 5':CCAUGUCUUCCAGACUAUCCAUGUCUUCC 3'


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target  3':UGUACAGAAGG----GUAG---UAGAAG 5'

 -22.20 9 RIC-seq
chrX:139866258:139866287:[+] chr18:57134002:57134024:[-] nonBSJ supported 5UTR

circRNA 5':CCAUGUCUUCCAGACUAUCCAUGUCUUCCA 3'


            |||||||||| :||| :||||||


target  3':UGUACAGAAGG----GUAG---UAGAAGGG 5'

 -26.10 1 RIC-seq