Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866615:139866641:[+] chr13:114538486:114538505:[-] nonBSJ supported 5UTR

circRNA 5':UCUC--CAGGUCUUCCAGCAUCUCCAGGG 3'


            ||| ||:|:|| ||||| ||


target  3': GAGCCGUUCGGA-------AGAGGACC 5'

 -16.90 2 RIC-seq
chrX:139866615:139866642:[+] chr13:114538486:114538506:[-] nonBSJ supported 5UTR

circRNA 5':UCUC--CAGGUCUUCCAGCAUCUCCAGGGC 3'


            ||| ||:|:|| ||||| |||


target  3': GAGCCGUUCGGA-------AGAGGACCC 5'

 -19.30 18 RIC-seq