Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866293:139866337:[+]	chr3:32726863:32726912:[+]	nonBSJ supported	5UTR	circRNA 5':UCCUUGUCUUCC-CU-CAAAUCCAUA-GCU-UCCGAAAAAUCC-AGGUCU 3' \|\|:\|\| \|\|:\|\| \|: \| \|\|\| \|\|\| \|\|\| \|\|\| \| target 3':CGGGACUGAGGGCGGCGGCCCGACCGGCGACAGGACCUGGAGGCUCCUGU 5'	-28.70	1	RIC-seq
chrX:139866294:139866353:[+]	chr3:32726853:32726939:[+]	nonBSJ supported	5UTR	circRNA 5':CCUUG---UCUUCCCU-CAAAU-------CCAUAGCUUCCGAAAAA-------------UCCAGGUCUUCC-AGGAAA--UCCGUGU 3' \|\|:\| \|\|\|\|\|\|\|\| \|\| \|\| :\|\|:\|\|\| \|\|\| \|\| \|:\|\|\| \|\|\|\| \|\| \|\|\|: target 3': GAGCCCAAGAAGGGACGUCCACCGCACCGGGACUGAGGGCGGCGGCCCGACCGGCGACAGGACCUGGAGGCUCCUGUUGAGACACGG 5'	-45.20	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866293:139866337:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC
chrX:139866294:139866353:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC