Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866566:139866584:[+] chr15:90809517:90809535:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAACUAAGCUA 3'


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target  3':GACAGCAAAGUCCCACGAC 5'

 -5.40 1 RIC-seq
chrX:139866566:139866606:[+] chr15:90809486:90809535:[+] nonBSJ supported Intron

circRNA 5':AUGUCUUCCAACUAAGCUACGUCUU-----CCAA---CA-AAUCCAUGUC 3'


            |||| ||| |||| || || |||||:


target  3':GACAGCAAAGUCCCACGACCCCCUUCUCUUGGUUACCGUCUUCGGUACGC 5'

 -11.50 14 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:139866566:139866606:[+] circRNA - chrX:139866592-139866593 C>A LICA-CN ICGC