5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865633:139865682:[+] | chr21:38575068:38575124:[+] | nonBSJ supported | 3UTR |
circRNA 5':CAAGGUCUUCCAUCAAAUACAGAUCUUCCAGCU----AAUCCAUGUCU-------UCCAGA 3' ||||: ||:||| |||| ||: |||| || ||||| target 3':UUUCCGUCUCCUUCCACUGGUUUAG----UCGAGUAUUUGAGUACUGAGAUUCAAAGGUCA 5' |
-22.50 | 1 | RIC-seq |
| chrX:139866117:139866155:[+] | chr21:38456426:38456477:[+] | nonBSJ supported | 5UTR |
circRNA 5':AUCUUC-CAAUG--GC---CUCCA--GGUCU-----UCCAGACUAUCCAUGU 3' ||||| || :| |||| ||| |||| :|:||||| target 3':AAGAAGAGUGAGAAUGAGAGAGGAACCCACUUAAAUAGGUGGUGUGGGUACU 5' |
-25.00 | 2 | RIC-seq |
| chrX:139865399:139865442:[+] | chr21:38512882:38512940:[+] | nonBSJ supported | CDS |
circRNA 5':AAGUCUUCCAA-UAAUCUCAAGGUCUUCCA-------------GAUAAUCCU---GAGCUU 3' ||| |||| :|| ||||||:|:|| :|||||||| :|:|| target 3':GUCAUCCGGUUCGUU--AGUUCCGGGAGUGACCCCAUCACAAGUUAUUAGGAGAAUUUGAC 5' |
-30.10 | 1 | RIC-seq |
| chrX:139865399:139865448:[+] | chr21:38512866:38512940:[+] | nonBSJ supported | CDS |
circRNA 5':AAGUCUUCCAA-UAAUCUCAAGGUCUUCCA-------------GAUAAUCCUGA--------------GCUUCCAGAA 3' ||| |||| :|| ||||||:|:|| :|||||||| |||| |||| target 3':GUCAUCCGGUUCGUU--AGUUCCGGGAGUGACCCCAUCACAAGUUAUUAGGAGAAUUUGACCAAAAGCCGAA-GUCUA 5' |
-33.80 | 1 | RIC-seq |