Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866368:139866417:[+] chrX:140270794:140270820:[-] nonBSJ supported CDS

circRNA 5':ACGUCUUCCAACAAAGCCAUGUCUUCCAUCAAAUUAAUGUC-UUCCAGCCU 3'


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target  3':AGCAG---------------CAGAAGCA---------GCAGUAGGGUCGGU 5'

 -24.60 14 RIC-seq
chrX:139866369:139866417:[+] chrX:140270794:140270820:[-] nonBSJ supported CDS

circRNA 5': CGUCUUCCAACAAAGCCAUGUCUUCCAUCAAAUUAAUGUC-UUCCAGCCU 3'


            |||| |||||| :||| |:||||||


target  3':AGCAG---------------CAGAAGCA---------GCAGUAGGGUCGGU 5'

 -24.60 1 RIC-seq