Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866500:139866538:[+] chr14:68466157:68466186:[+] nonBSJ supported Intron

circRNA 5':UCCAGAAAAUCCACGUCUUCCAACCAAGCCAUGUCUUCC 3'


            |||| ||||| |||| |||| ||


target  3':UGGUC----AGGUG-AGAACAUCCA----GUACUCUAGA 5'

 -14.80 4 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr14:68466157:68466186:[+] target - chr14:68466177-68466178 G>A LAML-KR ICGC