Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865469:139865500:[+] chr19:21476490:21476524:[-] nonBSJ supported CDS

circRNA 5':UCCAUG-UCUUC-CGGACAAUCCAUGUC-UUCCAA 3'


            |||:: ||||| |: || |||||


target  3':UGGUGUAAGAAGUGUAAACAUCCCAAAGAAAGGUC 5'

 -16.30 2 RIC-seq
chrX:139866154:139866208:[+] chr19:21476599:21476647:[-] nonBSJ supported CDS

circRNA 5':GUCU-UCCAGAAAAUCCUUGUCUUCCCUUAAAUCUAUAGCUUCCAAAAAAU-CCGGG 3'


            ||| ||||| || || ||||| ||| ||||


target  3':AAGAGAGGUCAU------ACUUAAUGGAAUACUA--AUCAUUCCACACUCCUGGCCA 5'

 -16.00 2 RIC-seq