Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866771:139866807:[+]	chr19:58638991:58639035:[-]	nonBSJ supported	Exon	circRNA 5':CUCCAGUGUGC-UGA--UCU--UCUG--ACAUUCA-GGUCUUCCA 3' \|\|\|\|\|\|\|\|\| \|\| \|\| \|\|\|\| \|\|\| \| ::\|\| \|\|\| target 3':AAGGUCACACACACAACAGUACAGACCAUGUCUGACUUAGUAGGG 5'	-24.70	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr19:58638991:58639035:[-]	target	-	chr19:58638996-58638997	G>T	LICA-CN	ICGC
chrX:139866771:139866807:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC