Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866208:139866258:[+]	chrX:14863092:14863129:[-]	nonBSJ supported	CDS	circRNA 5':GUCUUCCAGGAAAUCCGUGUCUUCCAGCAAGUCCACGUCUUCCAACAAAGC 3' \|\|\|: \|\|\|:\|: \|\|\| \|\|\| \|\| \|\| \|\|\|\|\|\|\|: target 3':GAGAG--------AGGUAUUAAACAUCG-UCAUGU-CAC---GUUGUUUUA 5'	-17.10	10	RIC-seq
chrX:139866220:139866258:[+]	chrX:14863096:14863129:[-]	nonBSJ supported	CDS	circRNA 5':AUCCGUGUCUUCCAGCAAGUCCACGUCUUCCAACAAAGC 3' \|\|\|:\|: \|\|\| \|\|\| \|\| \|\| \|\|\|\|\|\|\|: target 3':GAGGUAUUAAACAUCG-UCAUGU-CAC---GUUGUUUUA 5'	-17.00	1	RIC-seq
chrX:139866223:139866227:[+]	chrX:14863145:14863148:[-]	nonBSJ supported	CDS	circRNA 5':CGUGU 3' \|\|\| target 3':UCAC 5'	-2.20	2	RIC-seq
chrX:139866257:139866273:[+]	chrX:14863097:14863117:[-]	nonBSJ supported	CDS	circRNA 5':GCCAUGUCUUC---CAG-ACU 3' \|\|\|\|: \|\|\| \|\| target 3':AGGUAUUAAACAUCGUCAUGU 5'	-6.20	2	RIC-seq