Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865473:139865499:[+] chr10:93043221:93043254:[+] nonBSJ supported 3UTR

circRNA 5':UGUCUUCC---GGACAAUCCAUG--UCU---UCCA 3'


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target  3':UUAGAAGUAAACGUGAUCUAAUCAAAGAAUAAGG 5'

 -8.40 1 RIC-seq
chrX:139865473:139865510:[+] chr10:93043209:93043254:[+] nonBSJ supported 3UTR

circRNA 5':UGUCUUCC---GGACAAUCCAUG--UCU---UCCAAGAAGCUCCAA 3'


            |||||| | || ||| |||| |||||||||


target  3':UUAGAAGUAAACGUGAUCUAAUCAAAGAAUAAGGUACUUCGAGGUA 5'

 -26.60 44 RIC-seq