Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866637:139866673:[+]	chr3:196529941:196529980:[+]	nonBSJ supported	CDS	circRNA 5':CAGGGCUUCCAGCAU---CUGCUCG-UCUUCCAACAUCUCC 3' \|\|\|:\| \|\|\|\|\|\|\|: \|\|\| \|\|\|\|\| \|\|\| target 3':AUCCUGUAGGUCGUGUCGGACUCCUAAGAAGAAAAC-GAGA 5'	-29.30	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr3:196529941:196529980:[+]	target	-	chr3:196529963-196529964	G>C	LICA-CN	ICGC