Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865972:139865999:[+] chr1:242401398:242401439:[-] nonBSJ supported Intron

circRNA 5': GUCUUC----------CAGAAAAUCCAUGU-CUUC-----CAGU 3'


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target  3':ACAGAAGACUAACCUGUGUCUGAC---UAUAUGAAGUAUAAGUCU 5'

 -12.90 2 RIC-seq
chrX:139866619:139866624:[+] chr1:242355108:242355113:[-] nonBSJ supported Intron

circRNA 5':CAGGUC 3'


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target  3':CUCCAU 5'

 -3.60 2 RIC-seq