Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865692:139865748:[+] chr12:57704140:57704192:[-] nonBSJ supported CDS

circRNA 5':GUCUUCCACCAAAUCCAAGUCUUCCAGUAAAUCUAGUUCU---------UCCAGAAAAAUCUAGAU 3'


            |||||||||| ||| :|||| ||||| ||| ||


target  3':AAGAAGGUGGUCAAAAAAA------------AGACUAAGAAAGUAAUAAAGGUCCCAG-AGAACUC 5'

 -25.80 2 RIC-seq