Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866041:139866095:[+]	chr7:127222478:127222555:[-]	nonBSJ supported	CDS	circRNA 5':CCAAGUCUUCC--GGAUAAU-------UUGGGUCUUC----CUGAAA--AUCUACG-----UCU---UCCAAAAAAGC 3' \|\| \|: \|\| \|\|\|\| \|\| :\|\|\|\|\|\|::\| \|:\| \|:\|:\|\|: \|\|\| \|\|\| \|\|\| target 3':AGUCCGAUAGUCUCCUACUACACAGUCGACCCAGGGGUCCUGGCGGUGGUGGGUGUCCUGAAGACGCAGGACCG-UCGG 5'	-28.50	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr7:127222478:127222555:[-]	target	-	chr7:127222487-127222488	C>G	BTCA-JP	ICGC
chr7:127222478:127222555:[-]	target	-	chr7:127222521-127222522	G>A	LAML-KR	ICGC