Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865459:139865484:[+]	chr20:60151282:60151326:[+]	nonBSJ supported	Intron	circRNA 5':UUCCAGACAA----------------UCCAUGUCUU----CCGGAC 3' \|\|\|\|\| \|\|\| \|\| \|\|\|\|\|\| \| \|\|\| target 3':UGGGUC-GUUCCUACUUAGACUGUGCAGCGACAGAACGACGUCCUU 5'	-13.00	1	RIC-seq
chrX:139865952:139866017:[+]	chr20:60217783:60217853:[+]	nonBSJ supported	Intron	circRNA 5':ACGUCUUCCAGAAAAUCCAUG--------------UCUUCCAGAAAAUCCAUGUCUUCCAGUAACCUCCCAGUCUUCCAG 3' \|: \|:\|\|\|\|\|\|\|\| \|\|\|:\|\| \|:\|\| \|\|:\|\|\| \|\|\|\|:\|:\| \|\| target 3':CGUCGGAGGUCUUUACCUUUCCAUUCCUUCACCAAAGAGGGGACCU------CGGA--GUUAUUCCUUGGUCGGGACGU 5'	-34.30	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr20:60217783:60217853:[+]	target	-	chr20:60217790-60217791	C>A	PACA-CA	ICGC