Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865783:139865826:[+] chr19:13051142:13051172:[+] nonBSJ supported CDS

circRNA 5':CAGGUC-UUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCAGGU 3'


            ||| |:|||:|| ||||||||: || || ||


target  3': UCCUUCAGGGUUAG-------CAGAAGGUUC--CUC--GG-CC 5'

 -24.30 2 RIC-seq
chrX:139866223:139866244:[+] chr19:13049952:13049976:[+] nonBSJ supported CDS

circRNA 5':CGUGUCU-UCCAGC---AAGUCCACG 3'


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target  3':CCUAAGCUAGGUCGCCCUUCAGGUG 5'

 -23.10 1 RIC-seq