Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866669:139866722:[+]	chr12:124499537:124499590:[+]	nonBSJ supported	3UTR	circRNA 5':UCUCCACGUCUUCCA-GCAUCUCU--GUGUCUUCCAGCAUCUUCAUGUCU-UCCAACA 3' \|\|\|\|\|\|\|: :\|\|\| \|\|\| :\|\| \|\| \|\| \|\| \|\| \|\| target 3':CGAGGUGCGAUAACACUGUACUUUCUCACUAUUC--UGU-GAUGU-CAUUUAGCAUGA 5'	-17.50	28	RIC-seq
chrX:139866669:139866722:[+]	chr12:124499538:124499590:[+]	nonBSJ supported	3UTR	circRNA 5':UCUCCACGUCUUCCA-GCAUCUCU--GUGUCUUCCAGCAUCUUCAUGUCU-UCCAACA 3' \|\|\|\|\|\|\|: :\|\|\| \|\|\| :\|\| \|\| \|\| \|\| \|\| \|\| target 3':CGAGGUGCGAUAACACUGUACUUUCUCACUAUUC--UGU-GAUGU-CAUUUAGCAUG 5'	-17.70	1	RIC-seq
chrX:139866671:139866722:[+]	chr12:124499537:124499587:[+]	nonBSJ supported	3UTR	circRNA 5':UCCACGUCUUCCA-GCAUCUCU--GUGUCUUCCAGCAUCUUCAUGUCU-UCCAACA 3' \|\|\|\|\|: :\|\|\| \|\|\| :\|\| \|\| \|\| \|\| \|\| \|\| target 3': GGUGCGAUAACACUGUACUUUCUCACUAUUC--UGU-GAUGU-CAUUUAGCAUGA 5'	-12.60	13	RIC-seq
chrX:139866673:139866716:[+]	chr12:124499520:124499556:[+]	nonBSJ supported	3UTR	circRNA 5':CACGUCUUCCAGCAUCUCUGUGUCUUCCAGCAUCUUCAUGUCUU 3' \|\|: \|\| \|\|\| \| \|\| \|\|: \|\|\| \|\|\|\| \|:\|\| target 3': UGU-GAU-GUCAUUUAG-CAU-GAACACCUU--AAGUCCGGAC 5'	-10.20	1	RIC-seq
chrX:139866673:139866716:[+]	chr12:124499520:124499557:[+]	nonBSJ supported	3UTR	circRNA 5':CACGUCUUCCAGCAUCUCUGUGUCUUCCAGCAUCUUCAUGUCUU 3' \|\|: \|\| \|\|\| \| \|\| \|\|: \|\|\| \|\|\|\| \|:\|\| target 3':CUGU-GAU-GUCAUUUAG-CAU-GAACACCUU--AAGUCCGGAC 5'	-10.50	1	RIC-seq
chrX:139866681:139866716:[+]	chr12:124499520:124499550:[+]	nonBSJ supported	3UTR	circRNA 5':CCAGCAUCUCUGUGUCUUCCAGCAUCUUCAUGUCUU 3' \|\|\| \| \|\| \|\|: \|\|\| \|\|\|\| \|:\|\| target 3': GUCAUUUAG-CAU-GAACACCUU--AAGUCCGGAC 5'	-8.50	1	RIC-seq
chrX:139866681:139866716:[+]	chr12:124499520:124499551:[+]	nonBSJ supported	3UTR	circRNA 5':CCAGCAUCUCUGUGUCUUCCAGCAUCUUCAUGUCUU 3' \|\|\| \| \|\| \|\|: \|\|\| \|\|\|\| \|:\|\| target 3':UGUCAUUUAG-CAU-GAACACCUU--AAGUCCGGAC 5'	-9.20	1	RIC-seq
chrX:139866690:139866716:[+]	chr12:124499520:124499543:[+]	nonBSJ supported	3UTR	circRNA 5':CUGUGUCUUCCAGCAUCUUCAUGUCUU 3' \|\|\|: \|\|\| \|\|\|\| \|:\|\| target 3':AGCAU-GAACACCUU--AAGUCCGGAC 5'	-7.60	1	RIC-seq