Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866775:139866815:[+] chr19:48287548:48287581:[+] nonBSJ supported Intron

circRNA 5':AGUGUGCUGAUCUU--CUGACAUUCAGGUCUUCCAGUGUCUGC 3'


            || |||||| ||| |||| || :|||


target  3':GCAGACGACUCUCCCCGAC-------CCAGUUC--CAGGGACC 5'

 -21.80 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:139866775:139866815:[+] circRNA - chrX:139866793-139866794 C>T LICA-CN ICGC