5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865356:139865400:[+] | chr17:30320915:30320959:[+] | nonBSJ supported | CDS |
circRNA 5':UGUGUCAAGGUCUUCCAA---CAACUCCGGGUCUUCCAGCGACUUCAA 3' || ||| :|| |||| ||| |:|||| || | ||||| target 3':UCA-AGUCUCAUGUGGUUCCCGUUAC-GUCCAGUAGAGAAC-GAAGUC 5' |
-21.80 | 11 | RIC-seq |
| chrX:139865360:139865400:[+] | chr17:30320915:30320945:[+] | nonBSJ supported | CDS |
circRNA 5':UCAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAA 3' ||||| ||| |:|||| || | ||||| target 3': GUUCCC-------GUUAC-GUCCAGUAGAGAAC-GAAGUC 5' |
-17.00 | 1 | RIC-seq |
| chrX:139865360:139865400:[+] | chr17:30320915:30320946:[+] | nonBSJ supported | CDS |
circRNA 5':UCAAGGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAA 3' ||||| ||| |:|||| || | ||||| target 3':GGUUCCC-------GUUAC-GUCCAGUAGAGAAC-GAAGUC 5' |
-18.40 | 6 | RIC-seq |
| chrX:139865366:139865385:[+] | chr17:30322621:30322639:[+] | nonBSJ supported | CDS |
circRNA 5':UCUUCCAACAACUCCGGGUC 3' ||||| || || |:|:| target 3':UGAAGGG-GUAGAAGUCUAA 5' |
-12.60 | 2 | RIC-seq |
| chrX:139865366:139865400:[+] | chr17:30322609:30322639:[+] | nonBSJ supported | CDS |
circRNA 5':UCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAA 3' ||||| || || |:|:| || || :| |||| target 3':UGAAGGG-GUAGAAGUCUA--AGUUCUUU-AAGUC 5' |
-15.20 | 1 | RIC-seq |