5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865607:139865639:[+] | chr1:9909679:9909705:[-] | nonBSJ supported | 3UTR |
circRNA 5':AGGAAAUCCAUGUCUUCCAAUAAUUUCAAGGUC 3' ||| ||:||| ||:||||:| target 3':CCCUCUUCG---AGGAGGGGA--AAGGUUCUA 5' |
-16.30 | 1 | RIC-seq |
| chrX:139865608:139865672:[+] | chr1:9909649:9909702:[-] | nonBSJ supported | 3UTR |
circRNA 5':GGAAAUCCAU-GUCUUCCAAUAAUUUCAAGGUCUUCCAUCAAAUACAGAUCUUCCAGCUAAUCCAU 3' || |||| ||||| |||||: ||: || ||:||| || |||| target 3':ACUGGAGGUCUCAGAAACC----------CCAGAGUGUGACCCUCUUCGAGGAGGG-GAA-AGGUU 5' |
-31.60 | 2 | RIC-seq |
| chrX:139865618:139865639:[+] | chr1:9909687:9909705:[-] | nonBSJ supported | 3UTR |
circRNA 5':GUCUUCCAAUAAUUUCAAGGUC 3' ||:||| ||:||||:| target 3':GAGGAGGGGA--AAGGUUCUA 5' |
-14.90 | 1 | RIC-seq |
| chrX:139866125:139866176:[+] | chr1:9909649:9909698:[-] | nonBSJ supported | 3UTR |
circRNA 5':AUGGCCUCCAG-GUCUUCCAGACUAUC-CAUGUCUUCCAGAAAAUCCUUGUCUU 3' ||:||||||| ||||| || ||: |||| ||||: :||| target 3': ACUGGAGGUCUCAGAAACCCCAG-AGUGUGACCC---UCUUCGAGGAGGGGAAA 5' |
-39.00 | 1 | RIC-seq |
| chrX:139866125:139866177:[+] | chr1:9909649:9909698:[-] | nonBSJ supported | 3UTR |
circRNA 5':AUGGCCUCCAG-GUCUUCCAGACUAUC-CAUGUCUUCCAGAAAAUCCUUGUCUUC 3' ||:||||||| ||||| || ||: |||| ||||: :||| target 3': ACUGGAGGUCUCAGAAACCCCAG-AGUGUGACCC---UCUUCGAGGAGGGGAAA 5' |
-39.40 | 66 | RIC-seq |