Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865432:139865444:[+] chr1:144921845:144921859:[-] nonBSJ supported CDS

circRNA 5':AUCCU--GAGCUUCC 3'


            ||| :|||:||


target  3':AAGGUUCUUCGGAGA 5'

 -11.80 2 RIC-seq
chrX:139865494:139865506:[+] chr1:144921844:144921857:[-] nonBSJ supported CDS

circRNA 5':CUUCCAAGAAGCU 3'


            |||||||||||:


target  3':AAAGGUUCUUCGGA 5'

 -18.80 1 RIC-seq
chrX:139865494:139865509:[+] chr1:144921844:144921859:[-] nonBSJ supported CDS

circRNA 5':CUUCCAAGAAGCUCCA 3'


            |||||||||||: |


target  3':AAAGGUUCUUCGGAGA 5'

 -19.30 17 RIC-seq
chrX:139865494:139865509:[+] chr1:144921845:144921859:[-] nonBSJ supported CDS

circRNA 5':CUUCCAAGAAGCUCCA 3'


            |||||||||||: |


target  3': AAGGUUCUUCGGAGA 5'

 -18.40 1 RIC-seq
chrX:139865494:139865515:[+] chr1:144921844:144921864:[-] nonBSJ supported CDS

circRNA 5':CUUCCAAGAAGCUCCAAGUCUU 3'


            |||||||||||: |||


target  3':AAAGGUUCUUCGGAGAA-AGAC 5'

 -20.00 16 RIC-seq
chrX:139865494:139865515:[+] chr1:144921845:144921864:[-] nonBSJ supported CDS

circRNA 5':CUUCCAAGAAGCUCCAAGUCUU 3'


            |||||||||||: |||


target  3': AAGGUUCUUCGGAGAA-AGAC 5'

 -19.10 1 RIC-seq