Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866113:139866138:[+] chr5:137089635:137089664:[-] nonBSJ supported CDS

circRNA 5':CCACAUCUUCCAA-UGG-CCUCCAG-GUC 3'


            ||| |: ||| ::| || ||| |||


target  3':AGUGGUGGUGGUGCGUCAGGCAGUCUCAGG 5'

 -15.80 1 RIC-seq
chrX:139866126:139866138:[+] chr5:137089649:137089664:[-] nonBSJ supported CDS

circRNA 5':UGG-CCUCCAG-GUC 3'


            || || ||| |||


target  3':GUCAGGCAGUCUCAGG 5'

 -8.40 1 RIC-seq