Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866621:139866633:[+] chr11:117375678:117375691:[-] nonBSJ supported CDS

circRNA 5':GGUCUUCC-AGCAU 3'


            |||: || ||||


target  3':GCAGGUGGCUCGUC 5'

 -13.00 18 RIC-seq
chrX:139866621:139866633:[+] chr11:117375679:117375691:[-] nonBSJ supported CDS

circRNA 5':GGUCUUCC-AGCAU 3'


            |||: || ||||


target  3': CAGGUGGCUCGUC 5'

 -11.40 1 RIC-seq
chrX:139866621:139866660:[+] chr11:117375678:117375714:[-] nonBSJ supported CDS

circRNA 5':GGUCUUCC-AGCAUCUCCAGGGCUUCCAGCAUCUGCUCGUC 3'


            |||: || |||| || :| ||||| ||| |||


target  3':GCAGGUGGCUCGUCAAC-UCGUGU-GGUCGAA-ACG-GCAU 5'

 -30.00 24 RIC-seq