5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866602:139866646:[+] | chr2:242572942:242573001:[-] | nonBSJ supported | CDS |
circRNA 5': AUGUCUUCCUAUA----------------UCUCCAGGUCUUCCAGCAUCUC---CAGG-GCUUCC 3' |:|:| :||| |||| :|| ||||||||| |||: ||||| target 3':GUGCGG-GGGAAGCUACCUCCUUCACCGCGAGAG---UAGC-GGUCGUAGACACCGUCUGCGAAG 5' |
-33.70 | 1 | RIC-seq |
| chrX:139866602:139866655:[+] | chr2:242572924:242572989:[-] | nonBSJ supported | CDS |
circRNA 5': AUGUC-UUCCUAUAUCUC-CAGGUCUUCCAGCAUCUCCA----GG-GCUU------CCAGCAUCUGC 3' |||:| :|| ||||| || |:|::| || |||: |||||||||| target 3':UUACGGUGAGA--AUAGACAGUGCGGGGGAAGCUACCUCCUUCACCGCGAGAGUAGCGGUCGUAGACA 5' |
-37.10 | 4 | RIC-seq |
| chrX:139866602:139866661:[+] | chr2:242572924:242572981:[-] | nonBSJ supported | CDS |
circRNA 5': AUGUC-UUCCUAUAUCUC-CAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUGCUCGUCU 3' |||:| :|| ||||| || |:|::| |||: || ||| |||:| target 3':UUACGGUGAGA--AUAGACAGUGCGGGGGAAGCUACC--UCCUUCACCGCG-AGAGUAGCGGU 5' |
-31.20 | 6 | RIC-seq |
| chrX:139866620:139866659:[+] | chr2:242572911:242572945:[-] | nonBSJ supported | CDS |
circRNA 5':AGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUG-CUCGU 3' |||| |||| ||: ||||| | || target 3': UCAGUAGGUAUCUUUA----CGGUGAGAAUAGACAGUGC 5' |
-17.40 | 1 | RIC-seq |